No. Identification will only occur where ReconID = 0. So, you would need to rest Recon ID on those asset to 0 for Identification job to consider them in the ID activity.
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In addition, remember to change same Recon at relationships too. Otherwise you got a lot of orphans. It could be that you have to delete some related items manually.
it depends on your concrete Szenario. Give me some more details (what is related) and I willl guide you.