Set Job Property DEBUG_MODE_ENABLED=True and (re-) run the Patch Analysis job against the Windows 2012 R2 target.
Send the Job Run Log along with the debug logs (location is mentioned in the Job Run Log) to support along with the following information and they will help you out.
- When was the catalog last updated?
- What Filter(s) are set in the Catalog?
- What is set in Configuration => Patch Global Configuration => Windows => Windows Filter Configuration File
- What is set in Configuration => Patch Global Configuration => Shavlik URL Configuration
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Well, updating the permissions on the patch catalog for Windows 2012 for XYZ role resolved the issue.
Now I am able to see the list of missing & installed patches on target servers after running patch analysis job using XYZ role.